% two_genes % a simple model of two mutually inhibiting genes % the two protein concentrations are xa and xb % % ------------- state space description -------------- % number of genes 2 % partition for xa [0 8 12 18 22 30] % partition for xb [0 8 12 20] % % ------------- variable description -------------- % -- xa -- % number of production terms 1 % production rate (ie constant kappa) [6 27] % this is an uncertain parameter % production expression (ie regulation function) % prefix notation is used! more explanations in web page * - r 1 [1 4 5 6] [0 0 1 1] - r 2 [1 2 3 4] [0 0 1 1] % number of degradation terms 1 % degradation rate (ie constant gamma) [1] % this is a known parameter % degradation expression (ie regulation function) 1 % -- xb -- % number of production terms 1 % production rate [34] % degradation expression - r 1 [1 2 3 6] [0 0 1 1] % number of degradation terms 1 % degreadation rate [2] % degradation expression 1 % % ------------- expected behavior specifications -------------- % number of atomic propositions 4 % the atomic propositions % see explanations in web page {1 '>' 2} {2 '>' 2} {1 '>' 3} {2 '>' 3} % initial states for verification (NuSMV predicate or "All") All % property type (0: CTL; 1:LTL); % note: CTL is not supported yet! 1 % property text F ( (prop1 | prop2) & !(prop3 & prop4)) % compute liveness of SCCs (0: No; 1:Yes)? 1